2020 Publications

Galanti M, Shaman J. Direct observation of repeated infections with endemic coronaviruses. The Journal of infectious diseases. 2020 Jan 1.

Orenbuch R, Filip I, Comito D, Shaman J, Pe’er I, Rabadan R. arcasHLA: high-resolution HLA typing from RNAseq. Bioinformatics. 2020 Jan 1;36(1):33-40.

Shaman J, Galanti M. Direct Measurement of Rates of Asymptomatic Infection and Clinical Care-Seeking for Seasonal Coronavirus. medRxiv. 2020 Jan 1.

Pei S, Shaman J. Initial Simulation of SARS-CoV2 Spread and Intervention Effects in the Continental US. medRxiv. 2020 Jan 1.

Matienzo N, Youssef MM, Comito D, Lane B, Ligon C, Morita H, Winchester A, Decker ME, Dayan P, Shopsin B, Shaman J. Respiratory viruses in pediatric emergency department patients and their family members. Influenza and Other Respiratory Viruses. 2020 Jan 1.

Nardone A, Casey JA, Morello-Frosch R, Mujahid M, Balmes JR, Thakur N. Associations between historical residential redlining and current age-adjusted rates of emergency department visits due to asthma across eight cities in California: an ecological study. The Lancet Planetary Health. 2020 Jan 1;4(1):e24-31.

Lamb MR, Kandula S, Shaman J. Differential COVID‐19 case positivity in New York City neighborhoods: Socioeconomic factors and mobility. Influenza and Other Respiratory Viruses. 2020 Jan 1.

Rader B, White LF, Burns MR, Chen J, Brilliant J, Cohen J, Shaman J, Brilliant L, Hawkins JB, Scarpino SV, Astley CM. Mask Wearing and Control of SARS-CoV-2 Transmission in the United States. medRxiv. 2020 Jan 1.

Buonocore JJ, Casey JA, Croy R, Spengler JD, McKenzie L. Air monitoring stations far removed from drilling activities do not represent residential exposures to Marcellus shale air pollutants. Response to the Paper by Hess et al. on proximity-based unconventional natural gas exposure metrics. International Journal of Environmental Research and Public Health. 2020 Jan;17(2):504.

Gould CF, Schlesinger SB, Molina E, Bejarano ML, Valarezo A, Jack DW. Household fuel mixes in peri-urban and rural Ecuador: Explaining the context of LPG, patterns of continued firewood use, and the challenges of induction cooking. Energy Policy. 2020 Jan 1;136:111053.

Yang W, Shaff J, Shaman J. COVID-19 Transmission Dynamics and Effectiveness of Public Health Interventions in New York City during the 2020 Spring Pandemic Wave. medRxiv. 2020 Jan 1.

Yamana T, Pei S, Shaman J. Projection of COVID-19 Cases and Deaths in the US as Individual States Re-open May 4, 2020. medRxiv. 2020 Jan 1.

Parks RM, Bennett JE, Tamura-Wicks H, Kontis V, Toumi R, Danaei G, Ezzati M. Anomalously warm temperatures are associated with increased injury deaths. Nature medicine. 2020 Jan;26(1):65-70.

Zhang J, Li D, Xu X, Ziska LH, Zhu J, Liu G, Zhu C. The potential role of sucrose transport gene expression in the photosynthetic and yield response of rice cultivars to future CO2 concentration. Physiologia Plantarum. 2020 Jan;168(1):218-26.

Pagliaccio D, Herbstman JB, Perera F, Tang D, Goldsmith J, Peterson BS, Rauh V, Margolis AE. Prenatal exposure to polycyclic aromatic hydrocarbons modifies the effects of early life stress on attention and Thought Problems in late childhood. Journal of Child Psychology and Psychiatry. 2020 Jan 7.

Krasna H, Czabanowska K, Jiang S, Khadka S, Morita H, Kornfeld J, Shaman J. The Future of Careers at the Intersection of Climate Change and Public Health: What Can Job Postings and an Employer Survey Tell Us?. International journal of environmental research and public health. 2020 Jan;17(4):1310.

Ran J, Kioumourtzoglou MA, Sun S, Han L, Zhao S, Zhu W, Li J, Tian L. Source-Specific Volatile Organic Compounds and Emergency Hospital Admissions for Cardiorespiratory Diseases. International journal of environmental research and public health. 2020 Jan;17(17):6210.

Shearston JA, Johnson AM, Domingo-Relloso A, Kioumourtzoglou MA, Hernández D, Ross J, Chillrud SN, Hilpert M. Opening a Large Delivery Service Warehouse in the South Bronx: Impacts on Traffic, Air Pollution, and Noise. International Journal of Environmental Research and Public Health. 2020 Jan;17(9):3208.

Zhang T, Chillrud SN, Yang Q, Pitiranggon M, Ross J, Perera F, Ji J, Spira A, Breysse PN, Rodes CE, Miller R. Characterizing peak exposure of secondhand smoke using a real‐time PM2. 5 monitor. Indoor air. 2020 Jan;30(1):98-107.

Wang Y, Qian M, Tang D, Herbstman J, Perera F, Wang S. A powerful and flexible weighted distance-based method incorporating interactions between DNA methylation and environmental factors on health outcomes. Bioinformatics. 2020 Feb 1;36(3):653-9.

Gould CF, Urpelainen J, Sais JH. The role of education and attitudes in cooking fuel choice: Evidence from two states in India. Energy for Sustainable Development. 2020 Feb 1;54:36-50.

Heaney AK, Alexander KA, Shaman J. Ensemble forecast and parameter inference of childhood diarrhea in Chobe District, Botswana. Epidemics. 2020 Mar 1;30:100372.

Yamana TK, Shaman J. A framework for evaluating the effects of observational type and quality on vector-borne disease forecast. Epidemics. 2020 Mar 1;30:100359.

Henneman LR, Dedoussi IC, Casey JA, Choirat C, Barrett SR, Zigler CM. Comparisons of simple and complex methods for quantifying exposure to individual point source air pollution emissions. Journal of Exposure Science & Environmental Epidemiology. 2020 Mar 17:1-0.

Vega FE, Ziska LH, Simpkins A, Infante F, Davis AP, Rivera JA, Barnaby JY, Wolf J. Early growth phase and caffeine content response to recent and projected increases in atmospheric carbon dioxide in coffee (Coffea arabica and C. canephora). Scientific Reports. 2020 Apr 3;10(1):1-1.

Hall KS, Samari G, Garbers S, Casey SE, Diallo DD, Orcutt M, Moresky RT, Martinez ME, McGovern T. Centring sexual and reproductive health and justice in the global COVID-19 response. The Lancet. 2020 Apr 11;395(10231):1175-7.

Cao X, Li J, Cheng L, Deng Y, Li Y, Yan Z, Duan L, Yang J, Niu Q, Perera F, Nie J. The associations between prenatal exposure to polycyclic aromatic hydrocarbon metabolites, umbilical cord blood mitochondrial DNA copy number, and children's neurobehavioral development. Environmental Pollution. 2020 Apr 16:114594.

Li R, Pei S, Chen B, Song Y, Zhang T, Yang W, Shaman J. Substantial undocumented infection facilitates the rapid dissemination of novel coronavirus (SARS-CoV-2). Science. 2020 May 1;368(6490):489-93.

Li R, Pei S, Chen B, Song Y, Zhang T, Yang W, Shaman J. Substantial undocumented infection facilitates the rapid dissemination of novel coronavirus (SARS-CoV-2). Science. 2020 May 1;368(6490):489-93.

Casey JA, Su JG, Henneman LR, Zigler C, Neophytou AM, Catalano R, Gondalia R, Chen YT, Kaye L, Moyer SS, Combs V. Coal-fired power plant closures and retrofits reduce asthma morbidity in the local population. Nature Energy. 2020 May;5(5):365-6.

Casey JA, Su JG, Henneman LR, Zigler C, Neophytou AM, Catalano R, Gondalia R, Chen YT, Kaye L, Moyer SS, Combs V. Improved asthma outcomes observed in the vicinity of coal power plant retirement, retrofit and conversion to natural gas. Nature Energy. 2020 May;5(5):398-408.

Shea B, Knowlton K, Shaman J. Assessment of Climate-Health Curricula at International Health Professions Schools. JAMA Network Open. 2020 May 1;3(5):e206609-.

Casey JA, Su JG, Henneman LR, Zigler C, Neophytou AM, Catalano R, Gondalia R, Chen YT, Kaye L, Moyer SS, Combs V. Publisher Correction: Coal-fired power plant closures and retrofits reduce asthma morbidity in the local population. Nature Energy. 2020 May 14:1-.

Gervais M, Shaman J, Kushnir Y. Impact of the North Atlantic Warming Hole on Sensible Weather. Journal of Climate. 2020 May 15;33(10):4255-71.

Gould CF, Schlesinger SB, Molina E, Bejarano ML, Valarezo A, Jack DW. Long-standing LPG subsidies, cooking fuel stacking, and personal exposure to air pollution in rural and peri-urban Ecuador. Journal of Exposure Science & Environmental Epidemiology. 2020 May 15:1-4.

Zhang Y, Li T, Ma R, Yin Z, Wang J, He MZ, Xu D, Gao X, Wang Q, Kraus VB, Lv Y. Long-term exposure to ambient fine particulate matter and fasting blood glucose level in a Chinese elderly cohort. Science of The Total Environment. 2020 May 15;717:137191.

Galanti M, Comito D, Ligon C, Lane B, Matienzo N, Ibrahim S, Shittu A, Tagne E, Birger R, Ud‐Dean M, Filip I, Morita H, Rabadan R, Anthony S, Freyer GA, Dayan P, Shopsin B, Shaman J. Active surveillance documents rates of clinical care seeking due to respiratory illness. Influenza and other respiratory viruses. 2020 May 16.

Kalia V, Walker DI, Krasnodemski KM, Jones DP, Miller GW, Kioumourtzoglou MA. Unsupervised dimensionality reduction for exposome research. Current Opinion in Environmental Science & Health. 2020 May 19.

Shankar AV, Quinn AK, Dickinson KL, Williams KN, Masera O, Charron D, Jack D, Hyman J, Pillarisetti A, Bailis R, Kumar P. Everybody stacks: Lessons from household energy case studies to inform design principles for clean energy transitions. Energy Policy. 2020 Jun 1;141:111468.

Tran KV, Casey JA, Cushing LJ, Morello-Frosch R. Residential Proximity to Oil and Gas Development and Birth Outcomes in California: A Retrospective Cohort Study of 2006–2015 Births. Environmental Health Perspectives. 2020 Jun 3;128(6):067001.

Mani S, Jain A, Tripathi S, Gould CF. Sustained LPG use requires progress on broader development outcomes. Nature Energy. 2020 Jun 5:1-2.

Bruxvoort KJ, Bider-Canfield Z, Casey JA, Qian L, Pressman A, Liang AS, Robinson S, Jacobsen SJ, Tartof SY. Outpatient urinary tract infections in an era of virtual healthcare: trends from 2008 to 2017. Clinical Infectious Diseases. 2020 Jun 24;71(1):100-8.

Paksarian D, Rudolph KE, Stapp EK, Dunster GP, He J, Mennitt D, Hattar S, Casey JA, James P, Merikangas KR. Association of outdoor artificial light at night with mental disorders and sleep patterns among US adolescents. JAMA psychiatry. 2020 Jul 8.

He MZ, Kinney PL, Li T, Chen C, Sun Q, Ban J, Wang J, Liu S, Goldsmith J, Kioumourtzoglou MA. Short-and intermediate-term exposure to NO2 and mortality: a multi-county analysis in China. Environmental Pollution. 2020 Jun 1;261:114165.

McGee G, Perkins NJ, Mumford SL, Kioumourtzoglou MA, Weisskopf MG, Schildcrout JS, Coull BA, Schisterman EF, Haneuse S. Methodological Issues in Population-Based Studies of Multigenerational Associations. American Journal of Epidemiology. 2020 Jul 1.

Gould CF, Urpelainen J. The gendered nature of liquefied petroleum gas stove adoption and use in rural India. The Journal of Development Studies. 2020 Jul 2;56(7):1309-29.

Leung JM, Martinez ME. Circadian Rhythms in Environmental Health Sciences. Current environmental health reports. 2020 Jul 13:1-0.

Sun Z, Chen C, Yan M, Shi W, Wang J, Ban J, Sun Q, He MZ, Li T. Heat wave characteristics, mortality and effect modification by temperature zones: a time-series study in 130 counties of China. International Journal of Epidemiology. 2020 Jul 25.

Emeruwa UN, Ona S, Shaman JL, Turitz A, Wright JD, Gyamfi-Bannerman C, Melamed A. Associations between built environment, neighborhood socioeconomic status, and SARS-CoV-2 infection among pregnant women in New York City. JAMA. 2020 Jul 28;324(4):390-2.

Perera F, Cooley D, Berberian A, Mills D, Kinney P. Co-Benefits to Children’s Health of the US Regional Greenhouse Gas Initiative. Environmental Health Perspectives. 2020 Jul 29;128(7):077006.

Ma Y, Pei S, Shaman JL, Dubrow R, Chen K. Role of meteorological factors in the transmission of COVID-19 in the United States. Climatological, Meteorological, and Environmental factors in the COVID-19 pandemic. 2020 Aug 4.

Dolcini J, Kioumourtzoglou MA, Cayir A, Sanchez-Guerra M, Brennan KJ, Dereix AE, Coull BA, Spiro III A, Vokonas P, Schwartz J, Baccarelli AA. Age and mitochondrial DNA copy number influence the association between outdoor temperature and cognitive function: Insights from the VA Normative Aging Study. Environmental Epidemiology (Philadelphia, Pa.). 2020 Aug;4(4).

Nardone AL, Casey JA, Rudolph KE, Karasek D, Mujahid M, Morello-Frosch R. Associations between historical redlining and birth outcomes from 2006 through 2015 in California. PloS one. 2020 Aug 7;15(8):e0237241.

Pei S, Dahl KA, Yamana TK, Licker R, Shaman J. Compound Risks of Hurricane Evacuation amid the COVID‐19 Pandemic in the United States. GeoHealth. 2020 Aug 11:e2020GH000319.

Lovinsky-Desir S, Jung KH, Montilla M, Quinn J, Cahill J, Sheehan D, Perera F, Chillrud SN, Goldsmith J, Perzanowski M, Rundle A. Locations of Adolescent Physical Activity in an Urban Environment and their Associations with Air Pollution and Lung Function. Annals of the American Thoracic Society. 2020 Aug 19(ja).

Gould CF, Hou X, Richmond J, Sharma A, Urpelainen J. Jointly modeling the adoption and use of clean cooking fuels in rural India. Environmental Research Communications. 2020 Aug 24;2(8):085004.

Gemmill A, Casey JA, Karasek D, Bruckner T, Mayo JA, Lee HC, Stevenson DK, Shaw GM, Catalano R. Stillbirths and live births in the periviable period. Annals of epidemiology. 2020 Sep 1;49:8-12.

deSouza P, Braun D, Parks RM, Schwartz J, Dominici F, Kioumourtzoglou MA. Nationwide Study of Short-Term Exposure to Fine Particulate Matter and Cardiovascular Hospitalizations among Medicaid Enrollees. Epidemiology. 2020 Sep 29.

Ziska LH. An Overview of Rising CO2 and Climatic Change on Aeroallergens and Allergic Diseases. Allergy, Asthma & Immunology Research. 2020 Sep;12(5):771.

Rowland ST, Boehme AK, Rush J, Just AC, Kioumourtzoglou MA. Can ultra short-term changes in ambient temperature trigger myocardial infarction?. Environment International. 2020 Oct 1;143:105910.

Daniel S, Balalian AA, Insel BJ, Liu X, Whyatt RM, Calafat AM, Rauh VA, Perera FP, Hoepner LA, Herbstman J, Factor-Litvak P. Prenatal and early childhood exposure to phthalates and childhood behavior at age 7 years. Environment International. 2020 Oct 1;143:105894.

Gemmill A, Catalano R, Alcalá H, Karasek D, Casey JA, Bruckner TA. The 2016 presidential election and periviable births among Latina women. Early Human Development. 2020 Oct 3:105203.

deSouza P, Braun D, Parks RM, Schwartz J, Dominici F, Kioumourtzoglou MA. Nationwide Study of Short-term Exposure to Fine Particulate Matter and Cardiovascular Hospitalizations Among Medicaid Enrollees. Epidemiology. 2020 Oct 13;32(1):6-13.

Kramer SC, Pei S, Shaman J. Forecasting influenza in Europe using a metapopulation model incorporating cross-border commuting and air travel. PLOS Computational Biology. 2020 Oct 14;16(10):e1008233.

Allison K, Wu H, Marianthi-Anna K, Marcela TO, Ivan P, Alejandra C, Maricruz T, Emily O. Prenatal Maternal Phthalate Exposures and Child Lipid and Adipokine Levels at Age Six: A Study from the PROGRESS Cohort of Mexico City. Environmental Research. 2020 Oct 14:110341.

Kontis V, Bennett JE, Rashid T, Parks RM, Pearson-Stuttard J, Guillot M, Asaria P, Zhou B, Battaglini M, Corsetti G, McKee M. Magnitude, demographics and dynamics of the effect of the first wave of the COVID-19 pandemic on all-cause mortality in 21 industrialized countries. Nature Medicine. 2020 Oct 14:1-0.

Yang W, Kandula S, Huynh M, Greene SK, Van Wye G, Li W, Chan HT, McGibbon E, Yeung A, Olson D, Fine A, Shaman J. Estimating the infection-fatality risk of SARS-CoV-2 in New York City during the spring 2020 pandemic wave: a model-based analysis. The Lancet Infectious Diseases. 2020 Oct 19.

Shi L, Wu X, Yazdi MD, Braun D, Awad YA, Wei Y, Liu P, Di Q, Wang Y, Schwartz J, Dominici F, Kioumourtzoglou MA. Long-term effects of PM2· 5 on neurological disorders in the American Medicare population: a longitudinal cohort study. The Lancet Planetary Health. 2020 Oct 19.

McGee G, Weisskopf MG, Kioumourtzoglou MA, Coull BA, Haneuse S. Informatively empty clusters with application to multigenerational studies. Biostatistics. 2020 Oct;21(4):775-89.

Pei S, Shaman J. Aggregating forecasts of multiple respiratory pathogens supports more accurate forecasting of influenza-like illness. PLOS Computational Biology. 2020 Oct 22;16(10):e1008301.

Wang W, He J, Wang Z, Gu J, Liu L, Zhang W, Ziska LH, Zhu J. Leaf characteristics of rice cultivars with a stronger yield response to projected increases in CO2 concentration. Physiologia Plantarum. 2020 Oct 22.

Kehm RD, Oskar S, Tehranifar P, Zeinomar N, Rundle AG, Herbstman JB, Perera F, Miller RL, Terry MB. Associations of prenatal exposure to polycyclic aromatic hydrocarbons with pubertal timing and body composition in adolescent girls: implications for breast cancer risk. Environmental Research. 2020 Oct 22:110369.

Volk HE, Perera F, Braun JM, Kingsley SL, Gray K, Buckley J, Clougherty JE, Croen LA, Eskenazi B, Herting M, Just AC. Prenatal Air Pollution Exposure and Neurodevelopment: A Review and Blueprint for a Harmonized Approach within ECHO. Environmental Research. 2020 Oct 22:110320.

Bomfim R, Pei S, Shaman J, Yamana T, Makse HA, Andrade Jr JS, Lima Neto AS, Furtado V. Predicting dengue outbreaks at neighbourhood level using human mobility in urban areas. Journal of the Royal Society Interface. 2020 Oct 28;17(171):20200691.

Shaman J, Galanti M. Will SARS-CoV-2 become endemic?. Science. 2020 Oct 30;370(6516):527-9.

Peters S, Visser AE, Weisskopf M, Kioumourtzoglou MA, Vermeulen R. Metals and neurodegeneration. Oxford Textbook of Neurologic and Neuropsychiatric Epidemiology. 2020 Nov 2:417.

Pei S, Kandula S, Shaman J. Differential effects of intervention timing on COVID-19 spread in the United States. Science Advances 6 Nov, eabd6370 (2020).

Casey JA, Fukurai M, Hernández D, Balsari S, Kiang MV. Power Outages and Community Health: a Narrative Review. Current Environmental Health Reports. 2020 Nov 11:1-3.

McGee G, Kioumourtzoglou MA, Weisskopf MG, Haneuse S, Coull BA. On the interplay between exposure misclassification and informative cluster size. Journal of the Royal Statistical Society: Series C (Applied Statistics). 2020 Nov;69(5):1209-26.

Pei S, Kandula S, Shaman J. Differential effects of intervention timing on COVID-19 spread in the United States. Science advances. 2020 Dec 1;6(49):eabd6370.

Elser H, Goldman-Mellor S, Morello-Frosch R, Deziel NC, Ranjbar K, Casey JA. Petro-riskscapes and environmental distress in West Texas: Community perceptions of environmental degradation, threats, and loss. Energy Research & Social Science. 2020 Dec 1;70:101798.

Gemmill A, Catalano R, Alcalá H, Karasek D, Casey JA, Bruckner TA. The 2016 presidential election and periviable births among Latina women. Early Human Development. 2020 Dec 1;151:105203.

Perera F, Berberian A, Cooley D, Shenaut E, Olmstead H, Ross Z, Matte T. Potential health benefits of sustained air quality improvements in New York City: A simulation based on air pollution levels during the COVID-19 shutdown. Environmental Research. 2020 Dec 4;193:110555.

Pei S, Dahl KA, Yamana TK, Licker R, Shaman J. Compound risks of hurricane evacuation amid the COVID‐19 pandemic in the United States. GeoHealth. 2020 Dec;4(12):e2020GH000319.

Huang Y, Kioumourtzoglou MA, Mittleman MA, Ross Z, Williams MA, Friedman AM, Schwartz J, Wapner RJ, Ananth CV. Air Pollution and Risk of Placental Abruption: A Study of Births in New York City, 2008-2014. American Journal of Epidemiology. 2020 Dec 9.

Wei L, Wang W, Zhu J, Wang Z, Wang J, Li C, Zeng Q, Ziska LH. Responses of rice qualitative characteristics to elevated CO2 and higher temperature: Implications for global nutrition. Journal of the Science of Food and Agriculture. 2020 Dec 18.

Neophytou AM, Kioumourtzoglou MA, Goin DE, Darwin KC, Casey JA. Addressing special cases of bias that frequently occur in perinatal epidemiology. International Journal of Epidemiology. 2020 Dec 25.

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