Ebola Species Found in Bats Ahead of Any Potential Outbreak

For the first time, scientists discovered a new ebola virus species in a host prior to detection in an infected human or sick animal.

The discovery of the Bombali virus in bats in Sierra Leone and the sequencing of the complete genome was officially published today in the journal Nature Microbiology. The Sierra Leone government announced preliminary findings in late July.

The discovery was made by scientists at the University of California Davis’ One Health Institute and the Center for Infection and Immunity (CII) at the Columbia University Mailman School of Public Health, working with the government of Sierra Leone and the University of Makeni and Metabiota. The work is part of the PREDICT Ebola Host Project, funded by the United States Agency for International Development.

PREDICT in action

The discovery illustrates the mission of USAID’s PREDICT project, which aims to find viruses before they spill over into humans. The Bombali virus has the potential to infect human cells, but it is unknown if the virus has already caused human infections or if it is harmful to humans.

“Identifying new viruses like Bombali ebolavirus in wildlife and testing their capacity for human infection can enhance our understanding of the pre-emergent viral diversity circulating in animals,” said co-lead author Simon Anthony, PhD, a virologist and assistant professor of Epidemiology at Columbia Public Health. “We want to discover viruses that have the genetic prerequisites for human infection and then prioritize them for further study and intervention.”

Bats likely hosts of ebolaviruses

Prior to the discovery of Bombali virus, five ebolavirus species had been described. For instance, Bombali virus is different from the Zaire ebolavirus, which killed thousands of people between 2013-2016. Despite more than 40 years of research, the reservoir hosts for these viruses is still unknown. But the discovery of Bombali virus adds to growing evidence that bats are the likely hosts of these viruses.

“If you want to prevent Ebola outbreaks, it’s important to know which species are hosts and can shed the virus,” said co-lead author Tracey Goldstein, PhD, an associate director of the One Health Institute at the UC Davis School of Veterinary Medicine. “Then we can help target changes in behavior so we can protect people, which is the overarching goal of our work.”

The PREDICT team sampled more than 6,000 animals in Sierra Leone and performed laboratory tests to look for both known and unknown ebolaviruses. Bombali virus was found in five individual bats belonging to two different species of insectivorous bats that were found roosting inside people’s houses.

Don’t kill bats

The researchers emphasize that people should not attempt to kill or eradicate bats in response to the discovery. In fact, killing bats can actually increase the risk of virus transmission, not halt it.

Bats also play important ecological and agricultural roles for pollination. Insectivorous bats eat thousands of insects each night, helping to control pests that can transmit disease and damage crops.

Reducing exposure

Researchers have been engaging with local communities throughout the project. They continue to share results, answer questions and discuss with communities how they can live safely with bats and reduce their risk of exposure to the virus.

Infected bats are not known to show signs of illness but can shed the virus in their saliva and feces. As a result, other animals and people may be exposed if they touch live or dead bats, ingest food or water on which bats have fed or if they come into contact with the urine or feces of infected bats.

Additional co-authors include Aiah Gbakima, Brian H Bird, James Bangura, Alexandre Tremeau-Bravard, Manjunatha N. Belaganahalli, Heather L Wells, Jasjeet K Dhanota, Eliza Liang, Michael Grodus, Rohit K. Jangra, Veronica A. DeJesus, Gorka Lasso, Brett R. Smith, Amara Jambai, Brima O Kamara, Sorie Kamara, William Bangura, Corina Monagin, Sagi Shapira, Christine K. Johnson, Karen Saylors, Edward M. Rubin, Kartik Chandran, W. Ian Lipkin, and Jonna A.K. Mazet.

Funding was provided by the United States Agency for International Development (USAID) Emerging Pandemic Threats PREDICT project (GHN-A-OO-09-00010-00), and by the National Institutes of Health (GM030518, S10OD012351, S10OD021764). The authors declare no competing financial interests.