Publications

Selected CII Publications

Metabolomic analysis of maternal mid-gestation plasma and cord blood in autism spectrum disorders (2023. doi: 10.1038/s41380-023-02051-w)

Deficient butyrate-producing capacity in the gut microbiome is associated with bacterial network disturbances and fatigue symptoms in ME/CFS (2023. doi: 10.1016/j.chom.2023.01.004)

Maternal mid-gestational and child cord blood immune signatures are strongly associated with offspring risk of ASD (2022. doi: 10.1038/s41380-021-01415-4)

Insights from myalgic encephalomyelitis/chronic fatigue syndrome may help unravel the pathogenesis of postacute COVID-19 syndrome (2021. doi: 10.1016/j.molmed.2021.06.002)

Virome Capture Sequencing Enables Sensitive Viral Diagnosis and Comprehensive Virome Analysis (2015. doi: 10.1128/mBio.01491-15)

Middle East respiratory syndrome coronavirus quasispecies that include homologues of human isolates revealed through whole-genome analysis and virus cultured from dromedary camels in Saudi Arabia (2014. doi: 10.1128/mBio.01146-14)

A multicenter blinded analysis indicates no association between chronic fatigue syndrome/myalgic encephalomyelitis and either xenotropic murine leukemia virus-related virus or polytropic murine leukemia virus (2012). doi: 10.1128/mBio.00266-12)

Genetic detection and characterization of Lujo virus, a new hemorrhagic fever-associated arenavirus from southern Africa (2009. doi: 10.1371/journal.ppat.1000455)

A New Arenavirus in a Cluster of Fatal Transplant-Associated Diseases (2008. doi: 10.1056/NEJMoa073785)

A Metagenomic Survey of Microbes in Honey Bee Colony Collapse Disorder (2007. doi: 10.1126/science.1146498)

Recent CII Publications

COVID-19 immune signatures in Uganda persist in HIV co-infection and diverge by pandemic phase (2024. doi: 10.1038/s41467-024-45204-3)

Validation of the VirCapSeq-VERT system for differential diagnosis, detection, and surveillance of viral infections (2023. doi: 10.1128/jcm.00612-23)

Application of VirCapSeq-VERT and BacCapSeq in the diagnosis of presumed and definitive neuroinfectious diseases (2023. doi: 10.1007/s13365-023-01172-w)

Bayesian statistics improves biological interpretability of metabolomics data from human cohorts (2023. doi: 10.3390/metabo13090984)

Pathogenesis and outcome of VA1 astrovirus infection in the buman brain are defined by disruption of neural functions in imbalanced host immune responses (2023. doi: 10.1371/journal.ppat.1011544)

Proteomics and cytokine analyses distinguish myalgic encephalomyelitis/chronic fatigue syndrome cases from controls (2023. doi: 10.1186/s12967-023-04179-3)

A Transcriptomic Classifier Model Identifies High-Risk Endotypes in a Prospective Study of Sepsis in Uganda (2023. doi: 10.1097/ccm.0000000000006023)

A multicenter virome analysis of blood, feces, and saliva in myalgic encephalomyelitis/chronic fatigue syndrome (2023. doi: 10.1002/jmv.28993)

Beyond the symptom: the biology of fatigue (2023. doi: 10.1093/sleep/zsad069)

ME/CFS and Long COVID share similar symptoms and biological abnormalities: road map to the literature (2023. doi: 10.3389/fmed.2023.1187163)